gatk-3.8/java/test/org/broadinstitute/sting/playground/gatk/walkers
ebanks 9a05e8143d Move to 4.0 and away from VCFRecord.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3780 348d0f76-0448-11de-a6fe-93d51630548a
2010-07-13 15:54:54 +00:00
..
HLAcaller Initial HLA Caller integration tests. Kind of painful, but will improve with code refactoring. 2010-06-18 20:35:27 +00:00
annotator Move to 4.0 and away from VCFRecord. 2010-07-13 15:54:54 +00:00
duplicates forgot to update md5s 2009-12-29 20:31:29 +00:00
poolseq A long overdue correction; all unit tests now end in 'UnitTest'. This was something we wanted to do for a while, and now with the performance tests coming, it was a good time to clean-up. Please label any new test appropriately: *UnitTest and *IntegrationTest are the two valid file name patterns for tests. 2010-04-08 06:14:15 +00:00
validation forgot to update a test, the md5sum of the underlying file changed (which is recorded in the ROD tests). 2010-06-18 13:27:56 +00:00
vcftools Moving over to 4.0 and away from VCFRecord 2010-07-13 14:07:10 +00:00
ClipReadsWalkersIntegrationTest.java -Pushed base quals back down into SAMRecord; if -OQ is used, the SAMRecord quals get updated automatically 2010-03-17 16:00:10 +00:00
HapmapPoolAllelicInfoIntegrationTest.java Hurrr -- this uses power as part of its output. Changes to the power calculation broke the md5s RIGHT AFTER I HAD FIXED THEM arghflrg. 2009-12-14 22:42:50 +00:00