gatk3的最后一个经典版本3.8

Ryan Poplin 9ca2828547 Bug fix for multiallelic records: When combining SNP and indel record the original alleles are reference padded in one case but not in the other. Added missing normalization of the haplotype likelihood matrix. Unfortunately turning the banded approach off for now because it kills specificity.		2011-10-27 09:51:40 -04:00
public	Merge branch 'master' of ssh://nickel.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/unstable	2011-10-26 23:31:11 -04:00
settings	Picard upgrade to 1.55.	2011-10-24 17:02:27 -04:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Embedding gsalib source and queueJobReport R scripts in the dist and package jars.	2011-10-24 15:58:34 -04:00
ivy.xml	Including private parts	2011-10-25 20:29:17 -04:00