gatk-3.8/java
hanna 9c809ed68e A walker to analyze the memory consumption of reference, reads, and RODs at
each base both in bytes and as a percentage of the used heap size.  

May be a bit buggy at this point; there are a lot of metrics around the Java
heap and I'm not completely sure that the metrics I'm outputting are exactly
the ones that I'm looking for. 

Also fixed a documentation bug in my Sizeof class.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5730 348d0f76-0448-11de-a6fe-93d51630548a
2011-05-03 17:08:15 +00:00
..
config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src A walker to analyze the memory consumption of reference, reads, and RODs at 2011-05-03 17:08:15 +00:00
test Make the default that we only output SNPs (so that when I make another release we don't get flooded with questions about why the UG is all of a sudden so slow) 2011-05-03 16:38:55 +00:00