gatk3的最后一个经典版本3.8

Mauricio Carneiro 9b55505c03 Fixing PairHMMIndelErrorModel array out of bounds ... This error was due to the ReadClipper change of contract. Before the read utils would return null if a read was entirely clipped, now it returns an empty (safe) GATKSAMRecord.		2012-01-03 18:08:46 -05:00
public	Fixing PairHMMIndelErrorModel array out of bounds	2012-01-03 18:08:46 -05:00
settings	SnpEff 2.0.5 support. Re-enabled SnpEff in the HybridSelectionPipeline.	2012-01-03 15:18:36 -05:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Merged bug fix from Stable into Unstable	2011-12-22 10:49:52 -05:00
ivy.xml	SnpEff 2.0.5 support. Re-enabled SnpEff in the HybridSelectionPipeline.	2012-01-03 15:18:36 -05:00