Mark DePristo fb9eb3d4ee PileupElement and LIBS cleanup ... -- function to create pileup elements in AlignmentStateMachine and LIBS -- Cleanup pileup element constructors, directing users to LIBS.createPileupFromRead() that really does the right thing		2013-01-11 15:17:17 -05:00
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downsampling	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
walkers	PileupElement and LIBS cleanup	2013-01-11 15:17:17 -05:00