gatk-3.8/java
hanna 98c268483e Fixed issues with the integration tests:
1) sam-jdk apparently no longer supports custom tags with type int[] values.
2) BAM output for indel cleaner integration test changed in a way that's so subtle it can't be seen after converting the output to .sam.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2439 348d0f76-0448-11de-a6fe-93d51630548a
2009-12-23 23:12:22 +00:00
..
config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src Fixed issues with the integration tests: 2009-12-23 23:12:22 +00:00
test/org/broadinstitute/sting Fixed issues with the integration tests: 2009-12-23 23:12:22 +00:00