1) sam-jdk apparently no longer supports custom tags with type int[] values. 2) BAM output for indel cleaner integration test changed in a way that's so subtle it can't be seen after converting the output to .sam. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2439 348d0f76-0448-11de-a6fe-93d51630548a |
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