gatk-3.8/public/scala
Mark DePristo 982192e2e4 MD5DB for integrationtest management now writes out a md5mismatches files for clean analysis
-- This file is in integrationtests/md5mismatches.txt, and looks like:

expected        observed        test
7fd0d0c2d1af3b16378339c181e40611        2339d841d3c3c7233ebba9a6ace895fd        test BeagleOutputToVCF
43865f3f0d975ee2c5912b31393842f8        1b9c4734274edd3142a05033e520beac        testBeagleChangesSitesToRef
daead9bfab1a5df72c5e3a239366118e        27be14f9fc951c4e714b4540b045c2df        testDiffObjects:master=/local/dev/depristo/itest/public/testdata/diffTestMaster.vcf,test=/local/dev/depristo/itest/public/testdata/diffTestTest.vcf,md5=daead9bfab1a5df72c5e3a239366118e

-- Associated cleanup with making md5db an instantiated object, rather than a bunch of static methods
2012-06-14 16:42:27 -04:00
..
qscript/org/broadinstitute/sting/queue/qscripts Minor updates to pacbio data processing script to make it work with the latest bwa version/settings. 2012-05-22 10:24:45 -04:00
src/org/broadinstitute/sting/queue Fix a nasty script bug in Queue 2012-06-14 16:42:26 -04:00
test/org/broadinstitute/sting/queue MD5DB for integrationtest management now writes out a md5mismatches files for clean analysis 2012-06-14 16:42:27 -04:00