Eric Banks 5f5edeca63 Reverting move of BQSR tests to public, as per DR's email		2012-07-19 10:02:05 -04:00
..
exampleBAM.bam	PPP pipeline test	2011-12-11 17:32:21 -05:00
exampleBAM.bam.bai	PPP pipeline test	2011-12-11 17:32:21 -05:00
exampleBAM.simple.bai	…
exampleBAM.simple.bam	…
exampleDBSNP.vcf	PPP pipeline test	2011-12-11 17:32:21 -05:00
exampleFASTA-3contigs.fasta	Adding as many test data files into public/testdata as possible	2012-05-24 10:58:30 -04:00
exampleFASTA-combined.fasta	Adding as many test data files into public/testdata as possible	2012-05-24 10:58:30 -04:00
exampleFASTA-windows.fasta	Adding as many test data files into public/testdata as possible	2012-05-24 10:58:30 -04:00
exampleFASTA.dict	…
exampleFASTA.fasta	…
exampleFASTA.fasta.amb	Data Processing Pipeline Test	2011-12-12 00:24:51 -05:00
exampleFASTA.fasta.ann	Data Processing Pipeline Test	2011-12-12 00:24:51 -05:00
exampleFASTA.fasta.bwt	Data Processing Pipeline Test	2011-12-12 00:24:51 -05:00
exampleFASTA.fasta.fai	…
exampleFASTA.fasta.pac	Data Processing Pipeline Test	2011-12-12 00:24:51 -05:00
exampleFASTA.fasta.rbwt	Data Processing Pipeline Test	2011-12-12 00:24:51 -05:00
exampleFASTA.fasta.rpac	Data Processing Pipeline Test	2011-12-12 00:24:51 -05:00
exampleFASTA.fasta.rsa	Data Processing Pipeline Test	2011-12-12 00:24:51 -05:00
exampleFASTA.fasta.sa	Data Processing Pipeline Test	2011-12-12 00:24:51 -05:00
exampleGATKReport.eval	Adding as many test data files into public/testdata as possible	2012-05-24 10:58:30 -04:00
exampleGATKReportv1.tbl	Adding as many test data files into public/testdata as possible	2012-05-24 10:58:30 -04:00
exampleGATKReportv2.tbl	Adding as many test data files into public/testdata as possible	2012-05-24 10:58:30 -04:00
exampleGRP.grp	Changing the logic of the -standard argument; the way it stands currently one can never turn off the cycle or context covariates. Now they are on by default and users must opt out of them to turn them off.	2012-07-04 00:21:21 -04:00
exampleNORG.bam	…
exampleNORG.bam.bai	…
testfile.sam	Adding Unit Tests to cover the exception catching for Picard errors: because we are using String matching, we want to ensure that we know if/when the exception text changes underneath us.	2012-07-18 21:48:58 -04:00