gatk3的最后一个经典版本3.8

Ryan Poplin 93fc48739a In CGL ensure that the alleles match exactly between the comp track and the external likelihoods track. ... -- Mostly important for indels. -- Added integration tests to cover this and the new skipFiltered argument.		2013-04-26 15:01:04 -04:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected	Merge pull request #193 from broadinstitute/eb_contamination_fixing_for_reduced_reads	2013-04-26 09:48:45 -07:00
public	Merge pull request #193 from broadinstitute/eb_contamination_fixing_for_reduced_reads	2013-04-26 09:48:45 -07:00
settings	Rev picard, sam-jdk, tribble, and variant jars to version 1.90.1442	2013-04-25 14:05:24 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
build.xml	Add additional necessary class files to na12878kb.jar target	2013-04-23 14:03:48 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00