gatk-3.8/scala/qscript/playground
kshakir f1f9bd6dcc Due to recent LSF hiccups put a very brief (.5-2min) retry around getting status. Can't wait too long because statuses are archived an hour after exit.
TODO: Switch to bulk status checks and add status archive lookups.
Sending SIGTERM(15) instead of SIGKILL(9) to allow for graceful termination of child process.
Printing out the name of the QScripts in the compile error text.
Added a pipelineretry -PR pass through for the MFCP and MFCPTest.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5295 348d0f76-0448-11de-a6fe-93d51630548a
2011-02-23 18:59:08 +00:00
..
BatchMerge.q BatchMerge now uses the correct UG settings, recently added by Eric 2011-02-23 18:46:15 +00:00
FullCallingPipeline.q Evaluates within standard target and expanded target separately. 2011-02-17 23:04:24 +00:00
MultiFullCallingPipeline.scala Due to recent LSF hiccups put a very brief (.5-2min) retry around getting status. Can't wait too long because statuses are archived an hour after exit. 2011-02-23 18:59:08 +00:00
recalibrate.scala Refactoring the qscript directory; oneoffs, playground, and core 2011-01-19 15:23:40 +00:00