kshakir c7dbf66d41 Added a javaMemoryLimit option for cases where the java -Xmx memory should be lower than the bsub memory limit. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4778 348d0f76-0448-11de-a6fe-93d51630548a		2010-12-02 22:38:06 +00:00
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qscript	Added a pipeline for merging batches. For now takes a file containing a list of VCFs, and a file containing a list of bams. Does not do anything smart (e.g. if you leave out some .bams or add some extra ones, you will not be warned). Heavy lifting done in (the beginnings of) a library for managing multi-batch or multi-project tasks.	2010-12-02 07:31:59 +00:00
src	Added a javaMemoryLimit option for cases where the java -Xmx memory should be lower than the bsub memory limit.	2010-12-02 22:38:06 +00:00
test/org/broadinstitute/sting/queue	Updated the Queue GATK generator and packaging to include more dependencies for fullCallingPipeline.q.	2010-11-30 15:29:40 +00:00