gatk-3.8/protected/java/src/org/broadinstitute/sting
Yossi Farjoun 9234a0efcd Merge pull request #223 from broadinstitute/mc_dt_gaddy_outputs
Bug fixes and missing interval functionality for Diagnose Targets

While the code seems fine, the complex parts of it are untested. This is probably fine for now, but private code can have a tendency to creep into the codebase once accepted. I would have preferred that unit test OR a big comment stating that the code is untested (and thus broken by Mark's rule).

It is with these cavets that I accept the pull request.
2013-05-16 09:25:54 -07:00
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gatk Merge pull request #223 from broadinstitute/mc_dt_gaddy_outputs 2013-05-16 09:25:54 -07:00
utils Added hidden mode for BQSR to force all read groups to be the same one. 2013-05-06 19:09:10 -04:00
package-info.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00