Yossi Farjoun 9234a0efcd Merge pull request #223 from broadinstitute/mc_dt_gaddy_outputs ... Bug fixes and missing interval functionality for Diagnose Targets While the code seems fine, the complex parts of it are untested. This is probably fine for now, but private code can have a tendency to creep into the codebase once accepted. I would have preferred that unit test OR a big comment stating that the code is untested (and thus broken by Mark's rule). It is with these cavets that I accept the pull request.		2013-05-16 09:25:54 -07:00
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java	Merge pull request #223 from broadinstitute/mc_dt_gaddy_outputs	2013-05-16 09:25:54 -07:00
scala/test/org/broadinstitute/sting/queue/pipeline/examples	Fix improper dependencies in QScripts used by pipeline tests, and attempt to fix the flawed MisencodedBaseQualityUnitTest	2013-02-27 04:45:53 -05:00