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corin 9ee30ce594 Whole genome pipeline script. currently chunks, cleans, calls, merges, selects and filters indels, recalibrates, and evals. 
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5627 348d0f76-0448-11de-a6fe-93d51630548a
 		2011-04-13 16:59:48 +00:00
..
BatchMerge.q Walkers can now specify a class extending from Gatherer to merge custom output formats. Add @Gather(MyGatherer.class) to the walker @Output. 2011-03-24 14:03:51 +00:00
FullCallingPipeline.q Walkers can now specify a class extending from Gatherer to merge custom output formats. Add @Gather(MyGatherer.class) to the walker @Output. 2011-03-24 14:03:51 +00:00
MultiFullCallingPipeline.scala Walkers can now specify a class extending from Gatherer to merge custom output formats. Add @Gather(MyGatherer.class) to the walker @Output. 2011-03-24 14:03:51 +00:00
recalibrate.scala Walkers can now specify a class extending from Gatherer to merge custom output formats. Add @Gather(MyGatherer.class) to the walker @Output. 2011-03-24 14:03:51 +00:00
wgs.q Whole genome pipeline script. currently chunks, cleans, calls, merges, selects and filters indels, recalibrates, and evals. 2011-04-13 16:59:48 +00:00