1. Throw a user error when the input data for a given genotype does not contain PLs. 2. Add VCF header line for --dbsnp input 3. Need to check that the UG result is not null 4. Don't error out at positions with no gVCFs (which is possible when using a dbSNP rod) |
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| .. | ||
| gatk-protected | ||
| scala/test/org/broadinstitute/sting/queue/pipeline/examples | ||
| pom.xml | ||