Menachem Fromer 9111966261 Merge branch 'master' of github.com:broadinstitute/gsa-unstable		2012-11-20 12:19:58 -05:00
..
CNV	Changed @Input to @Argument for non-File types	2012-10-26 01:21:05 -04:00
examples	RetryMemoryLimit now works with Scatter/Gather.	2012-10-09 21:51:03 -04:00
lib	Mostly small changes to my own scala scripts: .vcf.gz compatibility for output files, smarter beagle generation, simple script to scatter-gather combine variants. Whole genome indel calling now uses the gold standard indel set.	2012-02-22 17:20:04 -05:00
DataProcessingPipeline.scala	Fixed null checkes in ArgumentTypeDescriptor due to ArgumentMatchValue updates.	2012-10-18 16:57:15 -04:00
GATKResourcesBundle.scala	Rename hg19 files in bundle to b37 since that's what they are	2012-11-14 11:47:09 -05:00
MethodsDevelopmentCallingPipeline.scala	Turning off PHONE HOME option in the MDCP	2012-01-27 11:13:30 -05:00
PacbioProcessingPipeline.scala	Added explicit @ClassType annotations to @Argument for Option[Int] or Option[Double] since scala seems to change the reflected type to Option[Object] on some systems.	2012-10-19 13:20:29 -04:00