gatk3的最后一个经典版本3.8

Chris Hartl 91030e9afa Bugfix: records that get paired up during the resolution of multiple-records-per-site were not going into genotype-level filtering. Caught via testing. ... Testing for moltenized output, and for genotype-level filtering. This tool is now fully functional. There are three todo items: 1) Docs 2) An additional output table that gives concordance proportions normalized by records in both eval and comp (not just total in eval or total in comp) 3) Code cleanup for table creation (putting a table together the way I do takes -way- too many lines of code)		2013-01-18 09:49:48 -05:00
licensing	Cleaning CRLF terminations in the licenses	2013-01-10 17:06:29 -05:00
protected/java	Bugfix: records that get paired up during the resolution of multiple-records-per-site were not going into genotype-level filtering. Caught via testing.	2013-01-18 09:49:48 -05:00
public	Backporting LIBSPerformance improvements to original commit	2013-01-13 09:53:10 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Updating Queue maven version to 0.0.2	2013-01-10 13:46:49 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00