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gatk-3.8/public/scala/src/org/broadinstitute/sting/queue/util
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Mark DePristo 550fb498be Support for NT testing (default up to 4) for CC and UG 
-- Added convenience function addJobReportBinding to just new binding to the map (x -> y) as well
 		2011-12-14 18:45:00 -05:00
..
CollectionUtils.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
EmailMessage.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
EmailSettings.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
Logging.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
PrimitiveOptionConversions.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
QJobReport.scala Support for NT testing (default up to 4) for CC and UG 2011-12-14 18:45:00 -05:00
QScriptUtils.scala Default jobreport is now jobPrefix, so you see logs like Q-2508.jobreport.txt 2011-08-28 19:19:45 -04:00
ReflectionUtils.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
Retry.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
RetryException.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
ScalaCompoundArgumentTypeDescriptor.scala Updated to reflect new parse() function 2011-07-30 15:34:20 -04:00
ShellUtils.scala Queue now properly escapes all shell arguments in generated shell scripts 2011-12-01 18:13:44 -05:00
StringFileConversions.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
SystemUtils.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
TextFormatUtils.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
VCF_BAM_utilities.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00