fromer 03a0185566 Control unscattered output file location ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@6011 348d0f76-0448-11de-a6fe-93d51630548a		2011-06-17 15:53:25 +00:00
..
carneiro	Subversion crashed my intellij BADLY, so now moving the data processing pipeline to core in 2 steps.	2011-06-02 23:31:24 +00:00
chartl	Moving this script out of playground while I figure out what's going on.	2011-05-23 17:48:44 +00:00
delangel	Intermediate commit of indel consensus VQSR script, a couple of new features added, not for general use	2011-06-06 13:27:02 +00:00
depristo	Simple program that calls indels in CEU trio exomes and WGS can compared the results. Overall the indel calls really look good to me, given reasonably good input BAM files.	2011-06-16 12:56:04 +00:00
fromer	Control unscattered output file location	2011-06-17 15:53:25 +00:00
hanna	Incorporating Khalid's feedback.	2011-04-08 16:22:49 +00:00
kshakir	Walkers can now specify a class extending from Gatherer to merge custom output formats. Add @Gather(MyGatherer.class) to the walker @Output.	2011-03-24 14:03:51 +00:00
rpoplin	Removed unused importants, but some of these scripts are now out of date (they have been for a long time) so they don't compile anyway	2011-05-22 18:43:48 +00:00
QTools.q	Generalized association is now working. Output is in a horrific format. Implementation of T-testing. Improvements are to look for classes dynamically (a la VariantEval/VariantAnnotator), beautify output, and do optimizations where they exist.	2011-03-01 01:23:37 +00:00