hanna 0c2a957ae0 Better configuration support. Now supports everything that people have expressed interest in except edit distance. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2021 348d0f76-0448-11de-a6fe-93d51630548a		2009-11-11 20:54:49 +00:00
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Makefile	More preparation for bwa patch: create a crude, minimal build system to build	2009-11-06 18:41:01 +00:00
build_linux.sh	More preparation for bwa patch: create a crude, minimal build system to build	2009-11-06 18:41:01 +00:00
build_mac.sh	BWA/C changes have arrived in svn repository. Remove temporary storage from Sting repository.	2009-11-11 16:48:21 +00:00
bwa_gateway.cpp	Better configuration support. Now supports everything that people have expressed interest in except edit distance.	2009-11-11 20:54:49 +00:00
bwa_gateway.h	Better configuration support. Now supports everything that people have expressed interest in except edit distance.	2009-11-11 20:54:49 +00:00
org_broadinstitute_sting_alignment_bwa_BWACAligner.cpp	Better configuration support. Now supports everything that people have expressed interest in except edit distance.	2009-11-11 20:54:49 +00:00
org_broadinstitute_sting_alignment_bwa_BWACAligner.h	Better configuration support. Now supports everything that people have expressed interest in except edit distance.	2009-11-11 20:54:49 +00:00