Ryan Poplin 019145175b Major optimizations to graph construction through better use of built in graph.containsVertex and vertex.equals methods. Minor optimizations to MathUtils.approximateLog10SumLog10 method		2012-03-26 11:32:44 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Major optimizations to graph construction through better use of built in graph.containsVertex and vertex.equals methods. Minor optimizations to MathUtils.approximateLog10SumLog10 method	2012-03-26 11:32:44 -04:00
test	BQSR with GATKReport implementation	2012-03-23 15:42:32 -04:00