gatk-3.8/java/test/org/broadinstitute/sting
hanna aea121a9d5 <key>=<value> tagging support for command-line arguments. Unfortunately, still
very hard to validate and still very hard to use (requires core hacking to 
support additional tags).


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5038 348d0f76-0448-11de-a6fe-93d51630548a
2011-01-21 00:22:42 +00:00
..
alignment Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
commandline Fixed long-standing bug reported by Mauricio where @Arguments assigned to 2011-01-12 22:18:24 +00:00
datasources/pipeline Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
gatk <key>=<value> tagging support for command-line arguments. Unfortunately, still 2011-01-21 00:22:42 +00:00
jna For the fullCallingPipeline.q: 2011-01-20 22:34:43 +00:00
oneoffprojects/walkers Changing testing framework from junit -> testng, for its enhanced configurability. 2010-11-01 21:31:44 +00:00
playground/gatk/walkers consolidating the checking of the RMD sequence dictionary against the reference into a single function, and adding an integration test to test that empty VCFs pass (both the indexing and the seq dictionary validation). 2010-11-30 00:01:56 +00:00
utils V2 cleaner, easily testing, shared memory and distributed GATK job management. Serious unit testing. Very much cleaner processing. Some code cleanup remains in removing now unused classes but the system is ready for general testing. Confirmed that one can run the UG 100 ways parallel without error, but edge cases may remain. 2011-01-20 12:58:13 +00:00
BaseTest.java Updated the HG19 reference from v0 to v1 after the v0 was zeroed out. 2011-01-19 20:30:25 +00:00
StingTextReporter.java Cleanup testng listener configuration. 2010-11-15 23:43:14 +00:00
WalkerTest.java Remove testWalkerUnitTest; it doesn't actually do anything and just adds 2011-01-13 19:02:00 +00:00