chartl 8e0d191a70 Added a walker to help sort out which samples in a region are giving signal. Lots of reused code that shouldn't be. Will refactor later. ... Also fixed an "issue" with InsertSizeDistribution -- apparently for mate pairs, the first mate (karyotypically) will have a POSITIVE insert size, and the second a NEGATIVE insert size -- thus the insert size distribution was being conflated with enrichment/depletion of first-in-pair or second-in-pair reads. Gah. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5623 348d0f76-0448-11de-a6fe-93d51630548a		2011-04-13 13:53:31 +00:00
..
config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Added a walker to help sort out which samples in a region are giving signal. Lots of reused code that shouldn't be. Will refactor later.	2011-04-13 13:53:31 +00:00
test	Re-enabling disabled test. Apparently T-tests are very picky about your using an unbiased variance.	2011-04-13 03:05:50 +00:00