Mark DePristo 8caf39cb65 Experimental LikelihoodRankSum annotation ... -- Added experimental LikelihoodRankSum, which required slightly more detailed access to the information managed by the base class, so added an overloaded getElementForRead also provides access to the MostLikelyAllele class -- Added base class default implementation of getElementForPileupElement() which returns null, indicating that the pileup version isn't supported. -- Added @Override to many of the RankSum classes for safety's sake -- Updates to GeneralCallingPipeline: annotate sites with dbSNP IDs, -- R script to assess the value of annotations for VQSR		2013-06-21 13:57:11 -04:00
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gatk	Experimental LikelihoodRankSum annotation	2013-06-21 13:57:11 -04:00
utils	Removed plots generation from the BaseRecalibration software	2013-06-19 14:47:56 -04:00
package-info.java	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00