ebanks 8c32bb8f0a Complete the move over to VariantContext so that we can remove dependence on Variation (in the VCF code) ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3190 348d0f76-0448-11de-a6fe-93d51630548a		2010-04-16 19:41:42 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Complete the move over to VariantContext so that we can remove dependence on Variation (in the VCF code)	2010-04-16 19:41:42 +00:00
test/org/broadinstitute/sting	adding a catch for the exception thrown by samtools when it attempts to close /dev/null in the performance tests.	2010-04-16 17:41:48 +00:00