David Roazen caafe84e74 Rev htsjdk to version 1.132 and picard to version 1.131, and switch to using the versions in maven central ... -We now pull htsjdk and picard from maven central. -Updated the GATK codebase as necessary to adapt to changes in the Feature interface. -Since VCFHeader now requires that all header lines have unique keys, uniquified the keys of GVCFBlock header lines by including the min/max GQ in the key. Updated MD5s accordingly. -Other MD5s changed as a result of an htsjdk fix to eliminate "-0" in VCF output.		2015-05-14 15:26:23 -04:00
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gatk-package-distribution	Rev htsjdk to version 1.132 and picard to version 1.131, and switch to using the versions in maven central	2015-05-14 15:26:23 -04:00
gatk-queue-extensions-distribution	Rev htsjdk to version 1.132 and picard to version 1.131, and switch to using the versions in maven central	2015-05-14 15:26:23 -04:00
gatk-queue-package-distribution	Rev htsjdk to version 1.132 and picard to version 1.131, and switch to using the versions in maven central	2015-05-14 15:26:23 -04:00
gatk-tools-protected	Rev htsjdk to version 1.132 and picard to version 1.131, and switch to using the versions in maven central	2015-05-14 15:26:23 -04:00
pom.xml	Update pom versions to mark the start of GATK 3.4 development	2014-10-23 22:31:44 -04:00