Mark DePristo 8b0a629a31 Terrible bugfix ... -- The way I was handling the contig offset ordering wasn't correct. Now the contigs are always indexed in the order in which their corresponding populate() functions are called, so that the order of the contigs is given by the order in which they are in the file, or in our refDict. It has nothing to do with the contig index itself. -- SelectVariants no longers prints all samples to the screen if you aren't selecting any explicitly		2012-06-14 16:42:24 -04:00
..
config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Terrible bugfix	2012-06-14 16:42:24 -04:00
test	Efficient Genotype object Intermediate commit	2012-06-14 16:42:24 -04:00