Guillermo del Angel 8ae24912f4 a) Misc fixes in Phase1 indel vqsr script, ... b) More R-friendly VariantsToTable printing of AC in case of multiple alt alleles c) Rename FixPLOrderingWalker to FixGenotypesWalker and rewrote: no longer need older code, replaced with code to replace genotypes with all-zero PL's with a no-call.		2011-08-22 20:39:06 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	a) Misc fixes in Phase1 indel vqsr script,	2011-08-22 20:39:06 -04:00
test	Updated VariantEvalIntegrationTest since there's a new column separating nMixed and nComplex in CountVariants	2011-08-20 12:24:22 -04:00