8a93bb687b
-- When consecutive intervals were within the bandpass filter size the ActiveRegion traversal engine would create duplicate active regions. -- Now when flushing the activity profile after we jump to a new interval we remove the extra states which are outside of the current interval. -- Added integration test which ensures that the output VCF contains no duplicate records. Was failing test before this commit. |
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| .. | ||
| annotator | ||
| beagle | ||
| bqsr | ||
| compression/reducereads | ||
| diagnostics | ||
| diffengine | ||
| fasta | ||
| filters | ||
| genotyper | ||
| haplotypecaller | ||
| indels | ||
| phasing | ||
| validation | ||
| varianteval | ||
| variantrecalibration | ||
| variantutils | ||