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gatk3的最后一个经典版本3.8
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Java 95.8%
Scala 3.8%
R 0.2%
JavaScript 0.1%
 
 
 
 
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Mauricio Carneiro 8a51732049 Fixes to ReadClipper and added Reference Coordinate clipping. 
* Added reference coordinate based hard clipping functions. This allows you to set a hard cut on where you need the read to be trimmed despite indels.
* soft clipping was messing up cigar string if there was already a hard clip at the beginning of the read. Fixed.
* hard clipping now works with previously hard clipped reads.
 		2011-08-14 14:54:33 -04:00
public Fixes to ReadClipper and added Reference Coordinate clipping. 2011-08-14 14:54:33 -04:00
settings The tribble dependency is now handled through ivy. Revved tribble to r18 and removed obsolete build targets in build.xml 2011-08-11 16:38:29 -04:00
LICENSE One last test... 2011-06-28 19:18:17 -04:00
build.xml Fixing the javadoc/scaladoc targets in build.xml 2011-08-11 19:24:41 -04:00
ivy.xml The tribble dependency is now handled through ivy. Revved tribble to r18 and removed obsolete build targets in build.xml 2011-08-11 16:38:29 -04:00