hanna 8a503c86b6 Code supporting SSG proof-of-concept shared memory parallelism. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1765 348d0f76-0448-11de-a6fe-93d51630548a		2009-10-05 18:56:16 +00:00
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alignment	Fixed bug where not all alignments were returned if read aligned to multiple locations. Enhanced test suite to validate all alignments.	2009-10-04 18:20:20 +00:00
gatk	Code supporting SSG proof-of-concept shared memory parallelism.	2009-10-05 18:56:16 +00:00
playground	Modified CreatePedFileWalker to output PED file given HLA allele names	2009-10-05 03:06:42 +00:00
secondarybase	Rev'ing Picard, which includes the update to get all the reads in the query region (GSA-173). With it come a bunch of fixes, including retiring the FourBaseRecaller code, and updated md5 for some walker tests.	2009-09-30 20:37:59 +00:00
utils	changes for corrected GLF likelihood output, along with better tests	2009-10-01 20:45:05 +00:00