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gatk-3.8/java/src/net/sf/samtools
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hanna 87ff2b15d4 First step in introducing a patch to Picard: create our ideal interface into the BAM file for sharding. 
This commit can iterate over the BAM file, pulling out information about the blocks in the file without actually loading
or decompressing the reads.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2434 348d0f76-0448-11de-a6fe-93d51630548a
 		2009-12-23 21:35:08 +00:00
..
BAMChunkIterator.java First step in introducing a patch to Picard: create our ideal interface into the BAM file for sharding. 2009-12-23 21:35:08 +00:00
BlockReader.java First step in introducing a patch to Picard: create our ideal interface into the BAM file for sharding. 2009-12-23 21:35:08 +00:00
Chunk.java First step in introducing a patch to Picard: create our ideal interface into the BAM file for sharding. 2009-12-23 21:35:08 +00:00
ChunkTestHarness.java First step in introducing a patch to Picard: create our ideal interface into the BAM file for sharding. 2009-12-23 21:35:08 +00:00