kiran 87ba8b3451 Removed some useless code. Don't apply second-base test if the coverage is too high, since the binomial probs explode and return NaN or Infinite values. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@961 348d0f76-0448-11de-a6fe-93d51630548a		2009-06-10 08:27:06 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Removed some useless code. Don't apply second-base test if the coverage is too high, since the binomial probs explode and return NaN or Infinite values.	2009-06-10 08:27:06 +00:00
test/org/broadinstitute/sting	added tools to test read based traversals using the artificial in-memory SAM file tools, and testing of the PrintReadsWalker	2009-06-10 01:52:25 +00:00