gatk-3.8/java
hanna 87aca64716 Jumped the gun a bit on bam on-the-fly indexing -- Tim says it's not ready yet.
Turned it off by default and added a property to turn it back on.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4254 348d0f76-0448-11de-a6fe-93d51630548a
2010-09-10 21:16:03 +00:00
..
config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src Jumped the gun a bit on bam on-the-fly indexing -- Tim says it's not ready yet. 2010-09-10 21:16:03 +00:00
test Truncate the floating point numbers coming out of the variant recalibration walkers. Integration tests now work with both 1.6.0_16-b01 and 1.6.0_21-b06 2010-09-10 18:37:49 +00:00