gatk3的最后一个经典版本3.8

Ryan Poplin 871c8b3866 No need to consider haplotypes which Smith-Waterman aligns off the end of the large padded reference.		2013-02-14 11:18:10 -05:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected/java	No need to consider haplotypes which Smith-Waterman aligns off the end of the large padded reference.	2013-02-14 11:18:10 -05:00
public	Extend default timeout to 20 minutes	2013-02-13 17:43:40 -08:00
settings	Replace org.broadinstitute.variant with jar built from the Picard repo	2013-02-05 17:24:25 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Minor build.xml cleanup post-variant-migration	2013-02-06 11:16:52 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Replace org.broadinstitute.variant with jar built from the Picard repo	2013-02-05 17:24:25 -05:00