ebanks 7385cce494 Useful tool for calculating the perentage of misaligned reads at homozygous non-ref indel sites ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4013 348d0f76-0448-11de-a6fe-93d51630548a		2010-08-11 17:57:44 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Useful tool for calculating the perentage of misaligned reads at homozygous non-ref indel sites	2010-08-11 17:57:44 +00:00
test	moving tests over from the GATK to Tribble, and added a speed-up to the readNextRecord() that Mark suggested. Also removed the contained flag from the queries to Tribble in the GATK.	2010-08-10 17:54:59 +00:00