Mark DePristo 8656bd5e29 Haplotype now consolidates cigars in setCigar ... -- This fixes edge base bugs where non-consolidated cigars are causing problems in users of the Haplotype object. Input arguments are now checks (let's see if we blow up)		2013-04-08 12:47:47 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Haplotype now consolidates cigars in setCigar	2013-04-08 12:47:47 -04:00
test	System to merge multiple nearby alleles into block substitutions	2013-04-08 12:47:47 -04:00