gatk3的最后一个经典版本3.8

Mark DePristo 85b529cced Updating MD5s in HC and UG that changed due to new LIBS ... -- Resolved what was clearly a bug in UG (GGA mode was returning a neighboring, equivalent indel site that wasn't in input list. Not ideal) -- Trivial read count differences in HC		2013-01-11 15:17:19 -05:00
licensing	Cleaning CRLF terminations in the licenses	2013-01-10 17:06:29 -05:00
protected/java	Updating MD5s in HC and UG that changed due to new LIBS	2013-01-11 15:17:19 -05:00
public	Add some todos for future optimization to LIBS	2013-01-11 15:17:18 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Updating Queue maven version to 0.0.2	2013-01-10 13:46:49 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00