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.gitignore
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Deleted libJNILoglessPairHMM.so from git tracking
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2014-01-21 15:01:09 -08:00 |
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JNI_README
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1. Added more profiling code
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2014-01-27 14:32:44 -08:00 |
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LoadTimeInitializer.cc
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1. Added more profiling code
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2014-01-27 14:32:44 -08:00 |
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LoadTimeInitializer.h
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1. Added more profiling code
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2014-01-27 14:32:44 -08:00 |
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Makefile
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1. Cleaned up code
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2014-01-26 19:18:12 -08:00 |
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avx_function_instantiations.cc
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Clean up
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2014-01-26 11:36:06 -08:00 |
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baseline.cc
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Clean up
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2014-01-26 11:36:06 -08:00 |
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define-double.h
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Clean up
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2014-01-26 11:36:06 -08:00 |
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define-float.h
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Clean up
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2014-01-26 11:36:06 -08:00 |
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define-sse-double.h
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Clean up
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2014-01-26 11:36:06 -08:00 |
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define-sse-float.h
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Clean up
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2014-01-26 11:36:06 -08:00 |
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headers.h
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1. Integrated Mohammad's SSE4.2 code, Mustafa's bug fix and code to fix the
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2014-01-20 08:03:42 -08:00 |
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jni_common.h
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1. Cleaned up code
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2014-01-26 19:18:12 -08:00 |
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jnidebug.h
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1. Cleaned up code
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2014-01-26 19:18:12 -08:00 |
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org_broadinstitute_sting_utils_pairhmm_DebugJNILoglessPairHMM.cc
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1. Added more profiling code
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2014-01-27 14:32:44 -08:00 |
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org_broadinstitute_sting_utils_pairhmm_DebugJNILoglessPairHMM.h
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Temporary commit before moving to new native library
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2014-01-24 16:29:35 -08:00 |
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org_broadinstitute_sting_utils_pairhmm_VectorLoglessPairHMM.cc
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1. Added more profiling code
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2014-01-27 14:32:44 -08:00 |
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org_broadinstitute_sting_utils_pairhmm_VectorLoglessPairHMM.h
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1. Added more profiling code
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2014-01-27 14:32:44 -08:00 |
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pairhmm-1-base.cc
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1. Converted q,i,d,c in C++ from int* to char*
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2014-01-22 22:57:32 -08:00 |
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pairhmm-template-kernel.cc
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Clean up
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2014-01-26 11:36:06 -08:00 |
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pairhmm-template-main.cc
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Clean up
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2014-01-26 11:36:06 -08:00 |
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run.sh
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1. Added more profiling code
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2014-01-27 14:32:44 -08:00 |
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shift_template.c
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Clean up
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2014-01-26 11:36:06 -08:00 |
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sse_function_instantiations.cc
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Clean up
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2014-01-26 11:36:06 -08:00 |
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template.h
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Clean up
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2014-01-26 11:36:06 -08:00 |
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utils.cc
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1. Added more profiling code
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2014-01-27 14:32:44 -08:00 |
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utils.h
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1. Added more profiling code
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2014-01-27 14:32:44 -08:00 |
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vector_defs.h
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Clean up
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2014-01-26 11:36:06 -08:00 |
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vector_function_prototypes.h
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Clean up
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2014-01-26 11:36:06 -08:00 |
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