hanna 85a4fbc256 Bumping version of Picard for firehose compatibility. ... Integration tests were validated against svn rev 1861, before the wonder twins committed their changes. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1864 348d0f76-0448-11de-a6fe-93d51630548a		2009-10-16 19:38:56 +00:00
..
alignment	Read uints directly into longs.	2009-10-15 16:15:11 +00:00
gatk	Added ValidationData analysis type to VariantEvalWalker; this eval takes a GFF file with validated truth data positions (bound to "validation")and calculates the accuracy of the genotype calls bound to "eval".	2009-10-16 15:39:08 +00:00
playground	Added ValidationData analysis type to VariantEvalWalker; this eval takes a GFF file with validated truth data positions (bound to "validation")and calculates the accuracy of the genotype calls bound to "eval".	2009-10-16 15:39:08 +00:00
secondarybase	Rev'ing Picard, which includes the update to get all the reads in the query region (GSA-173). With it come a bunch of fixes, including retiring the FourBaseRecaller code, and updated md5 for some walker tests.	2009-09-30 20:37:59 +00:00
utils	Bumping version of Picard for firehose compatibility.	2009-10-16 19:38:56 +00:00