Ryan Poplin 850be5e9da Bug fix in SWPairwiseAlignment. ... -- When the alignments are sufficiently apart from each other all the scores in the sw matrix could be negative which screwed up the max score calculation since it started at zero.		2013-04-10 16:04:37 -04:00
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src/org/broadinstitute/sting	Critical bugfix for CommonSuffixSplitter to avoid infinite loops	2013-04-09 16:19:26 -04:00
test/org/broadinstitute/sting	Bug fix in SWPairwiseAlignment.	2013-04-10 16:04:37 -04:00