hanna 85037ab13f Fix for Kiran's sharding issue (Invalid GZIP header). General cleanup of ... Picard patch, including move of some of the Picard private classes we use to Picard public. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3087 348d0f76-0448-11de-a6fe-93d51630548a		2010-03-29 03:21:27 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Fix for Kiran's sharding issue (Invalid GZIP header). General cleanup of	2010-03-29 03:21:27 +00:00
test/org/broadinstitute/sting	First go of the new output system for VE2. There are three different report types supported right now (Table, Grep, CSV), which can be	2010-03-27 03:59:32 +00:00