hanna 03452c15c0 Cleanup GATKBAMIndex unit test to allow a more efficient access pattern for ... FindLargeShards. Runtime of FindLargeShards on papuan dataset is now 75min. GATK proper should benefit as well, although the benefits might be so small as to not be measurable. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5798 348d0f76-0448-11de-a6fe-93d51630548a		2011-05-12 21:50:33 +00:00
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net/sf	Did some refactoring which broke some unit tests, and then failed to run	2011-04-08 03:31:52 +00:00
org/broadinstitute/sting	Cleanup GATKBAMIndex unit test to allow a more efficient access pattern for	2011-05-12 21:50:33 +00:00