gatk3的最后一个经典版本3.8

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Mauricio Carneiro 839b918f58 Length metric updates to QualifyMissingIntervals * add a length of the overlaping interval metric as per CSER request * standardized the distance metrics to be positive when fully overlapping and the longest off-target tail (as a negative number) when not overlapping * add gatkdocs to the tool (finally!)		2013-10-04 10:18:13 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Length metric updates to QualifyMissingIntervals	2013-10-04 10:18:13 -04:00
public	Merge pull request #402 from broadinstitute/gg_dcov_docs	2013-09-27 07:07:21 -07:00
settings	Modify gatkdoc template to handle downsampling info better	2013-09-26 14:50:32 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	Resolving warnings	2013-09-23 12:42:22 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Changing from scala 2.9.2 to 2.10.2.	2013-09-23 12:42:22 -04:00

The Genome Analysis Toolkit