Mark DePristo 82f2131777 Simplied getAttributeAsX interfaces ... -- Removed versions getAttribriteAsX(key) that except on not having the value. -- Removed version that getAttributeAsXNoException(key) -- The only available assessors are now getAttributeAsX(key, default). -- This single accessors properly handle their argument types, so if the value is a double it is returned directly for getAttributeAsDouble(), or if it's a string it's converted to a double. If the key isn't found, default is returned.		2011-09-02 12:27:11 -04:00
..
R	queueJobReport is a public feature of Queue	2011-08-29 17:20:54 -04:00
c	Reinitialize random seed in the bwa bindings from the fixed seed stored in the	2011-07-22 13:41:53 -04:00
chainFiles	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
doc	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
java	Simplied getAttributeAsX interfaces	2011-09-02 12:27:11 -04:00
packages	Added edu.mit.broad.picard to Queue packaged jar.	2011-07-23 14:40:29 -04:00
perl	Moving these supported perl scripts to public	2011-07-01 17:26:25 -04:00
scala	Default jobreport is now jobPrefix, so you see logs like Q-2508.jobreport.txt	2011-08-28 19:19:45 -04:00
testdata	GZIP VCF for testing	2011-08-19 09:05:39 -04:00