gatk3的最后一个经典版本3.8

Mark DePristo 810e2da1d4 Cleanup and unit tests for EventType and ReadRecalibrationInfo in BQSR ... -- Added unit tests for EventType and ReadRecalibrationInfo -- Simplified interface of EventType. Previously this enum carried an index with it, but this is redundant with the enum.ordinal function. Now just using that function instead.		2013-01-04 11:39:25 -05:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	BQSR cleanup: merge Advanced and Standard recalibration engine into just the RecalibrationEngine	2013-01-04 11:39:24 -05:00
public	Cleanup and unit tests for EventType and ReadRecalibrationInfo in BQSR	2013-01-04 11:39:25 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Re-enabling contracts in tests in build.xml	2013-01-02 11:29:25 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Use build jars in test classpaths by default	2012-11-28 22:57:04 -05:00