gatk3的最后一个经典版本3.8

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Ron Levine 804b2a36b7 Fix SplitNCigar reads exception by making the list of RNAReadTransformer non-abstract, add test for -fixNDN Includes documentation changes for -fixNDN argument and the read transformer documentation. Documentation changes to CombineVariants		2015-01-14 22:22:05 -05:00
licensing	Updated license information	2014-10-14 17:10:12 -04:00
protected	Fix SplitNCigar reads exception by making the list of RNAReadTransformer non-abstract, add test for -fixNDN	2015-01-14 22:22:05 -05:00
public	Fix SplitNCigar reads exception by making the list of RNAReadTransformer non-abstract, add test for -fixNDN	2015-01-14 22:22:05 -05:00
settings/helpTemplates	Output JSON version of docs for Galaxy	2014-10-09 06:42:25 -04:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Faster builds, with updates to documentation generation.	2014-11-05 00:32:23 +08:00

The Genome Analysis Toolkit