Mauricio Carneiro 7ffedf211c Contig comparator -- sorting contigs like Picard ... This is very useful if you want to output your text files or manipulate data in the usual chromosome ordering : 1 2 3 ... 21 22 X Y GL??? ... Just use this comparator in any SortedSet class constructor and your data will be sorted like in the BAM file.		2011-07-24 02:33:19 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Contig comparator -- sorting contigs like Picard	2011-07-24 02:33:19 -04:00
test	Merge branch 'master' of ssh://gsa3.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/unstable	2011-07-21 23:01:11 -04:00