gatk3的最后一个经典版本3.8

Mark DePristo 7fd27a5167 Add band pass filtering activity profile ... -- Based on the new incremental activity profile -- Unit Tested! Fixed a few bugs with the old band pass filter -- Expand IncrementalActivityProfileUnitTest to test the band pass filter as well for basic properties -- Add new UnitTest for BandPassIncrementalActivityProfile -- Added normalizeFromRealSpace to MathUtils -- Cleanup unused code in new activity profiles		2013-01-23 13:46:01 -05:00
licensing	Refrain from pushing symlinks into the repo... not all filesystems treat it correctly	2013-01-22 15:18:19 -07:00
protected/java	Restructure ActivityProfiler into root class ActivityProfile and derived class BandPassActivityProfile	2013-01-23 13:45:21 -05:00
public	Add band pass filtering activity profile	2013-01-23 13:46:01 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Updating Queue maven version to 0.0.2	2013-01-10 13:46:49 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00