gatk-3.8/scala
carneiro 7f9ca6b28a full data processing pipeline, now deleting intermediate files and performing both phases (per lane and combined) of the processing.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5269 348d0f76-0448-11de-a6fe-93d51630548a
2011-02-17 23:34:00 +00:00
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qscript full data processing pipeline, now deleting intermediate files and performing both phases (per lane and combined) of the processing. 2011-02-17 23:34:00 +00:00
src/org/broadinstitute/sting FCP only adds the expand intervals QFunction once per script instead of once per QFunction using the ExpandTargets scala trait. 2011-02-17 19:09:03 +00:00
test/org/broadinstitute/sting/queue Defaulting the MFCP to run without a tear script. 2011-02-17 21:13:14 +00:00